Research
See our group’s website to learn more about our work
Summary I work on the intersection of ecology and evolution, with a strong focus on genomic data and on species inhabiting islands.
Biological systems I am currently focusing (have focused)
1) Hawaiian Tetragnatha spiders (I did a project with Rosemary Gillespie on this system). I have published the genome of one species, finding that spiders have expansions associated with chemosensory, worked on population genomics of the system, finding multiple genetic sources underlying repeated evolution. My former student, Heidi Yang ( now at UCLA ) is currently submitting a manuscript on transposable element evolution in this system. 2) Galápagos Scalesia (I did a postdoc with Mike Martin and Loren Rieseberg on the system). I published an approach to separate subgenomes on a polyploid assembly, and a perspective on island radiations. I am currently finishing a manuscript on transposable element evolution. I am currently working on developing the ecology & phenotypes of Scalesia with Juan Andino, Gonzalo Rivas-Torres and others. 3) Galápagos Opuntia (Side project with Gonzalo-Rivas and Felipe Zapata). We have released a biogeographic story on rXiv 4) Cabo Verde endemic sparrows (side project with Martim Melo, Ângela Ribeiro, Rauri Bowie and Mark Ravinet). News soon - we have a cool manuscript focusing on the idea of ‘evolutionary success’.
Collaborators
My approach to research consists in mobility and collaboration, benefiting from the direct expertise of leaders in different research fields, thus increasing the quality of my work and publications. This approach is highly cooperative, and is grounded on two ideas: “two brains think better than one” and “if you have worked in a topic for longer than I, it’s likely that you have something to say about my ideas, result or approach”. My work would thus not be possible without the knowledge, support, kindness and patience of multiple individuals. Here are some people who are collaborators of mine (alphabetically by first name):
- Angel Rivera-Colón, UIUC - RADseq genomics
- Bent Petersen, U of Copenhagen - Daisy evolution
- Bruce Baldwin, UC Berkeley - Daisy evolution
- Dimitar Dimitrov, U. of Bergen - Genome evolution of spiders
- Evandro Lopes, Technical University of the Atlantic - Cape verde sparrow evolution
- Felipe Zapata, UCLA - Prickly pear evolution
- Gonzalo Rivas-Torres, USFQ - Prickly pear evolution
- Herculano Dinis, Projecto Vitó - Cape verde sparrow evolution
- Hugo de Boer, U. of Oslo - Daisy evolution
- Hugo Alberto Valdebenito Milling, USFQ - Daisy evolution
- Jen Mandel, U of Memphis - Daisy evolution
- Joana Meier, Sanger Institute - Population genomics
- Joel Vizueta, U. of Barcelona - Comparative genomics & genome annotation
- Jonathan Ready, U. Federal do Pará - Fish evolution
- Juan Manuel Guayasamin, USFQ - Galápagos Lava Lizards
- Julian Catchen, UIUC - RADseq genomics
- María de Lourdes Torres Proaño, USFQ - Daisy evolution
- Mark Blaxter, Tree of Life project - Genome assembly and annotation
- Mark Ravinet, University of Nottingham - Population & comparative genomics, Cape verde Sparrows
- Martim Melo, CIBIO - Cape Verde sparrow evolution
- Martin Stervander, Natural History Museum UK - Island bird evolution
- Matt Knope, U of Hawai’i at Hilo - Hawaiian Daisy evolution
- Nicolas Rochette, UCLA - RADseq genomics
- Patricia Jaramillo Diaz, Charles Darwin Foundation - Daisy evolution
- Rauri Bowie, UC Berkeley - Cape Verde sparrow evolution
- Rosa Fernandéz, IBE Barcelona - Spider evolution and comparative genomics
- Rosemary Gillespie, UC Berkeley - Hawaiian spiders
- Rubén Torices, Juan Carlos - Daisy ecology
- Torsten Struck, Universoty of Oslo - PhD Advisor, cryptic species